Yana Safonova
Researcher
Algorithmic Biotechnology Lab
St. Petersburg State University
Russian Federation
Biography
Education: 2012 – present. St. Petersburg University of the Russian Academy of Sciences, Department of Mathematics and Information Technology, PhD student 2010 – 2012. Lobachevsky State University of Nizhny Novgorod, Computational Mathematics and Cybernetics Faculty, Department of Computer Aided Research, MSc in Applied Informatics 2006 – 2010. Lobachevsky State University of Nizhny Novgorod, Computational Mathematics and Cybernetics Faculty, Department of Computer Aided Research, BSc in Applied Informatics Projects: dipSPAdes: an assembler for highly polymorphic diploid genomes (including collaboration with Laboratory of Evolutionary Genomics in Moscow). dipSPAdes is available as a part of SPAdes genome assembler. Immunoinformatics: IgRepertoireConstructor, an algorithm for construction of antibody repertoire and immunoproteogenomics analysis IgSimulator, a versatile immunosequencing simulator IgQUAST, a quality assessment tool for of antibody repertoire(s) AntEvolo, an algorithm for evolutionary analysis of antibody repertoires
Research Interest
Bioinformatics, Immunoinformatics, Computational Genomics
