Roy Chaudhuri
Professor
Molecular Biology and Biotechnology
University of Sheffield
United Kingdom
Biography
Development of user-friendly software tools and online resources for exploring data from -omics technologies. Examples include coliBASE, Xbase and the recently-funded MicrobesNG.
Research Interest
My research interests are primarily in the area of bacterial genomics. Current research topics include: Comparative genomics and phylogenetics of bacterial pathogens, particularly E. coli and Salmonella Use of transposon insertion sequencing methods (TraDIS/TnSeq/HITS/InSeq) to identify essential bacterial genes and genes important for survival in particular environments such as during infection of a model system Development of user-friendly software tools and online resources for exploring data from -omics technologies. Examples include coliBASE, Xbase and the recently-funded MicrobesNG.
Publications
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Stafford GP, Chaudhuri RR, Haraszthy V, Friedrich V, Schäffer C, Ruscitto A, Honma K, Sharma A. Draft genome sequences of three clinical isolates of Tannerella forsythia isolated from subgingival plaque from periodontitis patients in the United States. Genome announcements. 2016 Dec 29;4(6):e01286-16.
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Bossé JT, Li Y, Rogers J, Crespo RF, Li Y, Chaudhuri RR, Holden MT, Maskell DJ, Tucker AW, Wren BW, Rycroft AN. Whole genome sequencing for surveillance of antimicrobial resistance in Actinobacillus pleuropneumoniae. Frontiers in microbiology. 2017;8.
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Dunne KA, Chaudhuri RR, Rossiter AE, Beriotto I, Browning DF, Squire D, Cunningham AF, Cole JA, Loman N, Henderson IR. Sequencing a piece of history: complete genome sequence of the original Escherichia coli strain. Microbial Genomics. 2017 Mar 23;3(3).
