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Anshul Kundaje

Assistant Professor
Department of Genetics
Stanford University School of Medicine
United States of America

Biography

Anshul Kundaje is an Assistant Professor of Genetics and Computer Science at Stanford University. His primary research area is large-scale computational regulatory genomics. He specializes in developing statistical and machine learning methods for large-scale integrative analysis of heterogeneous, high-throughput functional genomic and genetic data to decipher regulatory elements and long-range regulatory interactions, learn predictive regulatory network models across individuals, cell-types and species and improve detection and interpretation of natural and disease-associated genetic variation. Previously as a postdoc at Stanford and Research Scientist at MIT, Anshul was the lead computational analyst of the ENCODE Project and the Roadmap Epigenomics Project. Anshul is also a recipient of the 2014 Alfred Sloan Fellowship.

Research Interest

Their research focusses on development of statistical and machine learning methods for integrative analysis of diverse functional genomic and genetic data to learn models of gene regulation. We have led the analysis efforts of the Encyclopedia of DNA Elements (ENCODE) and The Roadmap Epigenomics Projects with the development of novel methods.

Publications

  • Gjoneska E, Pfenning A R, Mathys H, Quon G, Kundaje A, et al. (2015) Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer's disease. Nature 518(7539): 365-369.

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